How To Install pg2graphviz.pl on CentOS 8
In this tutorial, we will discuss How To Install pg2graphviz.pl on CentOS 8
yum package managers.
Also, we will demonstrate how to uninstall and update
pg2graphviz.pl as well.
If you are only interested in the installation command, here is a quick answer for you:
or if you use
sudo yum makecache && sudo yum -y install chado-utils
sudo dnf makecache && sudo dnf -y install chado-utils
But if you are interested in the details with step-by-step instructions, the following information will be helpful.
Short description: tools to add/extract data from Chado
First things first, you will need access to a server or computer running CentOS 8. This guide was written specifically with a server running CentOS 8 in mind, although it should also work on older, supported versions of the operating system.
Also, make sure you are running a regular, non-root user with sudo privileges configured on your server. When you have an account available, log in as your non-root user to begin.
There are several ways to install pg2graphviz.pl on CentOS 8. You can use (links are clickable):
In the following sections, we will describe each method in detail. You can choose one of them or refer to the recommended one.
First, update dnf packages database with
dnf by running the next command:
sudo dnf makecache --refresh
After updating database,
You can install pg2graphviz.pl using
dnf by running the
sudo dnf -y install chado-utils
Because pg2graphviz.pl is available in CentOS 8’s default
it is possible to install it from these repositories using the
To begin, update local packages database with
yum using the following command.
sudo yum makecache --refresh
Now can install pg2graphviz.pl package on your server/computer by running the following command:
sudo yum -y install chado-utils
To update all the packages available on the system:
If you want to update a specific package like pg2graphviz.pl in this example you should use the following command:
yum update chado-utils
To downgrade a package to an earlier version:
yum downgrade chado-utils
When you run the
dnf update, all system packages with available updates are updated.
However, if you want to upgrade a single package, then you would have to pass the package name as
the argument to the dnf update command.
dnf update chado-utils
To uninstall only the
pg2graphviz.pl package you can execute
sudo dnf remove chado-utils
This package contains several tools that can be used to extract data from Chado database or prepare data before upload. It is a subset above the Chado database schema and libraries. Chado is a relational database schema that underlies many GMOD installations. It is capable of representing many of the general classes of data frequently encountered in modern biology such as sequence, sequence comparisons, phenotypes, genotypes, ontologies, publications, and phylogeny.
You now have a full guide on how to install
yum package managers.
Also, we showed how to update manually as a single package and different ways to uninstall
the pg2graphviz.pl from CentOS 8.