How To Install pbopen on Kali Linux

In this guide, we’ll discuss How To Install pbopen on Kali Linux. Also, we will demonstrate how to uninstall and update pbopen.

One-liner install command

For those in a hurry, here's a one-line installation command:

sudo apt-get update && sudo apt -y install python-pbcore

But if you are interested in the detailed steps with descriptions, the following information is for you.

What is pbopen and what are the ways to install it?

Before beginning this tutorial, you will need access to a server or computer running Kali Linux. This guide was written specifically with a server running Kali Linux in mind, although it should also work on older, supported versions of the operating system.

Also, make sure you are running a regular, non-root user with sudo privileges configured on your server. When you have an account available, log in as your non-root user to begin.

There are several ways to install pbopen on Kali Linux. You can use (links are clickable):

In the following sections, we will describe each method in detail. You can choose one of them or refer to the recommended one.

Install pbopen using apt-get

First, update apt database with apt-get using the following command.

sudo apt-get update

After updating apt-get database, You can install pbopen using apt by running the following command:

sudo apt -y install python-pbcore

Install pbopen using apt

Because pbopen is available in Kali Linux’s default repositories, it is possible to install it from these repositories using the apt packaging system.

To begin, update apt database with apt using the following command.

sudo apt update

After updating apt database, You can install pbopen using apt by running the following command:

sudo apt -y install python-pbcore

Install pbopen using aptitude

If you want to follow this method, you might need to install aptitude first since aptitude is usually not installed by default on Kali Linux. Update apt database with aptitude using the following command.

sudo aptitude update

After updating aptitude database, You can install pbopen by running the following command:

sudo aptitude -y install python-pbcore

How to upgrade (update) a single package pbopen using apt-get?

First, you will need to update packages index. Run update command as usual:

sudo apt-get update

Next, to upgrade only the pbopen, e.g. single package, you should use the following format with the apt-get command/apt command:

sudo apt-get --only-upgrade install python-pbcore

Note that this command will not install any new packages! If you wish to install the package if it doesn't exist you may leave out --only-upgrade part.

How To Uninstall pbopen from Kali Linux

To uninstall only the pbopen package you can execute the following command:

sudo apt-get remove python-pbcore

Uninstall pbopen and all its dependencies

To uninstall pbopen and its dependencies that are no longer needed by Kali Linux, you can use the command below:

sudo apt-get -y autoremove python-pbcore

Remove pbopen with all configurations and data

To remove pbopen configuration and data from your system you can run the following purge command:

sudo apt-get -y purge python-pbcore

Remove pbopen completely (configurations, data and all of its dependencies)

And lastly, you can run the next command to remove absolutely everything related to pbopen package, e.g.: configurations, data and all of its dependencies. Just use this command:

sudo apt-get -y autoremove --purge python-pbcore

Extra info and code examples

The pbcore package provides Python modules for processing Pacific Biosciences data files and building PacBio bioinformatics applications. These modules include tools to read/write PacBio data formats, sample data files for testing and debugging, base classes, and utilities for building bioinformatics applications. This package is part of the SMRTAnalysis suite. This is the Python 2 module.

Conclusion

You now have a full guide on how to install pbopen using apt, apt-get and aptitude tools. Also, we showed how to update as a single package and different ways to uninstall the pbopen from Kali Linux.

See also:

How To Install pbopen on Fedora 34

How To Install pbopen on CentOS 8

How To Install pbopen on Kali Linux

How To Install pbopen on Debian 11

How To Install pbopen on Ubuntu 22.04

How To Install pbopen on Ubuntu 21.04

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