How To Install mason_frag_sequencing on Debian 11

In this guide, we’ll discuss How To Install mason_frag_sequencing on Debian 11. Also, we will demonstrate how to uninstall and update mason_frag_sequencing.

One-liner install command

For those in a hurry, here's a one-line installation command:

sudo apt-get update && sudo apt -y install seqan-apps

But if you are interested in the detailed steps with descriptions, the following information is for you.

What is mason_frag_sequencing and what are the ways to install it?

Before beginning this tutorial, you will need access to a server or computer running Debian 11. This guide was written specifically with a server running Debian 11 in mind, although it should also work on older, supported versions of the operating system.

Also, make sure you are running a regular, non-root user with sudo privileges configured on your server. When you have an account available, log in as your non-root user to begin.

There are several ways to install mason_frag_sequencing on Debian 11. You can use (links are clickable):

In the following sections, we will describe each method in detail. You can choose one of them or refer to the recommended one.

Install mason_frag_sequencing using apt-get

First, update apt database with apt-get using the following command.

sudo apt-get update

After updating apt-get database, You can install mason_frag_sequencing using apt by running the following command:

sudo apt -y install seqan-apps

Install mason_frag_sequencing using apt

Because mason_frag_sequencing is available in Debian 11’s default repositories, it is possible to install it from these repositories using the apt packaging system.

To begin, update apt database with apt using the following command.

sudo apt update

After updating apt database, You can install mason_frag_sequencing using apt by running the following command:

sudo apt -y install seqan-apps

Install mason_frag_sequencing using aptitude

If you want to follow this method, you might need to install aptitude first since aptitude is usually not installed by default on Debian 11. Update apt database with aptitude using the following command.

sudo aptitude update

After updating aptitude database, You can install mason_frag_sequencing by running the following command:

sudo aptitude -y install seqan-apps

How to upgrade (update) a single package mason_frag_sequencing using apt-get?

First, you will need to update packages index. Run update command as usual:

sudo apt-get update

Next, to upgrade only the mason_frag_sequencing, e.g. single package, you should use the following format with the apt-get command/apt command:

sudo apt-get --only-upgrade install seqan-apps

Note that this command will not install any new packages! If you wish to install the package if it doesn't exist you may leave out --only-upgrade part.

How To Uninstall mason_frag_sequencing from Debian 11

To uninstall only the mason_frag_sequencing package you can execute the following command:

sudo apt-get remove seqan-apps

Uninstall mason_frag_sequencing and all its dependencies

To uninstall mason_frag_sequencing and its dependencies that are no longer needed by Debian 11, you can use the command below:

sudo apt-get -y autoremove seqan-apps

Remove mason_frag_sequencing with all configurations and data

To remove mason_frag_sequencing configuration and data from your system you can run the following purge command:

sudo apt-get -y purge seqan-apps

Remove mason_frag_sequencing completely (configurations, data and all of its dependencies)

And lastly, you can run the next command to remove absolutely everything related to mason_frag_sequencing package, e.g.: configurations, data and all of its dependencies. Just use this command:

sudo apt-get -y autoremove --purge seqan-apps

Extra info and code examples

SeqAn is a C++ template library of efficient algorithms and data structures for the analysis of sequences with the focus on biological data. This library applies a unique generic design that guarantees high performance, generality, extensibility, and integration with other libraries. SeqAn is easy to use and simplifies the development of new software tools with a minimal loss of performance. This package contains the applications dfi, pair_align, micro_razers, seqan_tcoffee, seqcons, razers and tree_recon.

Conclusion

You now have a full guide on how to install mason_frag_sequencing using apt, apt-get and aptitude tools. Also, we showed how to update as a single package and different ways to uninstall the mason_frag_sequencing from Debian 11.

See also:

How To Install mason_frag_sequencing on CentOS 8

How To Install mason_frag_sequencing on Kali Linux

How To Install mason_frag_sequencing on Debian 11

How To Install mason_frag_sequencing on Fedora 34

How To Install mason_frag_sequencing on Ubuntu 22.04

How To Install mason_frag_sequencing on Ubuntu 21.04

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