How To Install g_rmsdist on CentOS 8
In this tutorial, we will discuss How To Install g_rmsdist on CentOS 8
using dnf
and yum
package managers.
Also, we will demonstrate how to uninstall and update
g_rmsdist
as well.
One-liner Install Command
If you are only interested in the installation command, here is a quick answer for you:
sudo yum makecache && sudo yum -y install gromacs
or if you use dnf
:
sudo dnf makecache && sudo dnf -y install gromacs
But if you are interested in the details with step-by-step instructions, the following information will be helpful.
What is g_rmsdist
and How to Install It?
Short description: Molecular dynamics simulator, with building and analysis tools
First things first, you will need access to a server or computer running CentOS 8. This guide was written specifically with a server running CentOS 8 in mind, although it should also work on older, supported versions of the operating system.
Also, make sure you are running a regular, non-root user with sudo privileges configured on your server. When you have an account available, log in as your non-root user to begin.
There are several ways to install g_rmsdist on CentOS 8. You can use (links are clickable):
In the following sections, we will describe each method in detail. You can choose one of them or refer to the recommended one.
Install g_rmsdist on CentOS 8 using dnf
First, update dnf packages database with dnf
by running the next command:
sudo dnf makecache --refresh
After updating database,
You can install g_rmsdist using dnf
by running the
following command:
sudo dnf -y install gromacs
Install g_rmsdist on CentOS 8 using yum
Because g_rmsdist is available in CentOS 8’s default
repositories,
it is possible to install it from these repositories using the yum
packaging
system.
To begin, update local packages database with yum
using the following command.
sudo yum makecache --refresh
Now can install g_rmsdist package on your server/computer by running the following command:
sudo yum -y install gromacs
How to upgrade (update) a single package g_rmsdist using yum?
To update all the packages available on the system:
yum update
If you want to update a specific package like g_rmsdist in this example you should use the following command:
yum update gromacs
To downgrade a package to an earlier version:
yum downgrade gromacs
How to Upgrade g_rmsdist on CentOS 8 with dnf?
When you run the dnf update
, all system packages with available updates are updated.
However, if you want to upgrade a single package, then you would have to pass the package name as
the argument to the dnf update command.
dnf update gromacs
How To remove g_rmsdist from CentOS 8
To uninstall only the g_rmsdist
package you can execute
the
following command:
sudo dnf remove gromacs
Extra info and code examples
GROMACS is a versatile package to perform molecular dynamics, i.e. simulate the Newtonian equations of motion for systems with hundreds to millions of particles. It is primarily designed for biochemical molecules like proteins and lipids that have a lot of complicated bonded interactions, but since GROMACS is extremely fast at calculating the nonbonded interactions (that usually dominate simulations) many groups are also using it for research on non- biological systems, e.g. polymers.
- Maintainer: Debichem Team
- Sources url: http://www.gromacs.org/
- Section/Category: science
Conclusion
You now have a full guide on how to install g_rmsdist
using dnf
and yum
package managers.
Also, we showed how to update manually as a single package and different ways to uninstall
the g_rmsdist from CentOS 8.