How To Install fastafetch on Debian 11
In this guide, we’ll discuss How To Install fastafetch on Debian 11.
Also, we will demonstrate how to uninstall and update
fastafetch
.
One-liner install command
For those in a hurry, here's a one-line installation command:
sudo apt-get update && sudo apt -y install exonerate
But if you are interested in the detailed steps with descriptions, the following information is for you.
What is fastafetch
and what are
the ways to install it?
Short description: generic tool for pairwise sequence comparison
Before beginning this tutorial, you will need access to a server or computer running Debian 11. This guide was written specifically with a server running Debian 11 in mind, although it should also work on older, supported versions of the operating system.
Also, make sure you are running a regular, non-root user with sudo privileges configured on your server. When you have an account available, log in as your non-root user to begin.
There are several ways to install fastafetch on Debian 11. You can use (links are clickable):
In the following sections, we will describe each method in detail. You can choose one of them or refer to the recommended one.
Install fastafetch using apt-get
First, update apt database with apt-get
using the following command.
sudo apt-get update
After updating apt-get
database,
You can install fastafetch using apt
by running the
following command:
sudo apt -y install exonerate
Install fastafetch using apt
Because fastafetch is available in Debian 11’s default repositories, it is possible to install it from these repositories using the apt packaging system.
To begin, update apt database with apt
using the following command.
sudo apt update
After updating apt
database,
You can install fastafetch using apt
by running the
following command:
sudo apt -y install exonerate
Install fastafetch using aptitude
If you want to follow this method, you might need to install aptitude first since aptitude is usually not installed by default on Debian 11. Update apt database with aptitude using the following command.
sudo aptitude update
After updating aptitude
database,
You can install fastafetch by running the following command:
sudo aptitude -y install exonerate
How to upgrade (update) a single package fastafetch using apt-get?
First, you will need to update packages index. Run update
command as
usual:
sudo apt-get update
Next, to upgrade only the fastafetch, e.g. single package, you should use the following format with the apt-get command/apt command:
sudo apt-get --only-upgrade install exonerate
Note that this command will not install any new packages! If you wish to install the
package if it doesn't exist you may leave out --only-upgrade
part.
It's Good to Know:
sudo apt-get install exonerate
This will upgrade the package even if is already installed.
How To Uninstall fastafetch from Debian 11
To uninstall only the fastafetch
package you can execute
the
following command:
sudo apt-get remove exonerate
Uninstall fastafetch and all its dependencies
To uninstall fastafetch and its dependencies that are no longer needed by Debian 11, you can use the command below:
sudo apt-get -y autoremove exonerate
Remove fastafetch with all configurations and data
To remove fastafetch configuration and data
from your system you can run the following purge
command:
sudo apt-get -y purge exonerate
Remove fastafetch completely (configurations, data and all of its dependencies)
And lastly, you can run the next command to remove absolutely everything related to fastafetch package, e.g.: configurations, data and all of its dependencies. Just use this command:
sudo apt-get -y autoremove --purge exonerate
Extra info and code examples
Exonerate allows you to align sequences using a many alignment models, using either exhaustive dynamic programming, or a variety of heuristics. Much of the functionality of the Wise dynamic programming suite was reimplemented in C for better efficiency. Exonerate is an intrinsic component of the building of the Ensembl genome databases, providing similarity scores between RNA and DNA sequences and thus determining splice variants and coding sequences in general. An In-silico PCR Experiment Simulation System (see the ipcress man page) is packaged with exonerate. This package also comes with a selection of utilities for performing simple manipulations quickly on fasta files beyond 2Gb
- Maintainer: Debian Med Packaging Team
- Sources url: https://www.ebi.ac.uk/about/vertebrate-genomics/software/exonerate
- Section/Category: science
Conclusion
You now have a full guide on how to install fastafetch
using apt, apt-get and aptitude tools.
Also, we showed how to update as a single package and different ways to uninstall
the fastafetch from Debian 11.