How To Install disulfinder on Fedora 34
In this tutorial, we will discuss How To Install disulfinder on Fedora 34
yum package managers.
Also, we will demonstrate how to uninstall and update
disulfinder as well.
One-liner Install Command
If you are only interested in the installation command, here is a quick answer for you:
or if you use
sudo yum makecache && sudo yum -y install disulfinder
sudo dnf makecache && sudo dnf -y install disulfinder
But if you are interested in the details with step-by-step instructions, the following information will be helpful.
disulfinder and How to Install It?
Short description: cysteines disulfide bonding state and connectivity predictor
First things first, you will need access to a server or computer running Fedora 34. This guide was written specifically with a server running Fedora 34 in mind, although it should also work on older, supported versions of the operating system.
Also, make sure you are running a regular, non-root user with sudo privileges configured on your server. When you have an account available, log in as your non-root user to begin.
There are several ways to install disulfinder on Fedora 34. You can use (links are clickable):
In the following sections, we will describe each method in detail. You can choose one of them or refer to the recommended one.
Install disulfinder on Fedora 34 using dnf
First, update dnf packages database with
dnf by running the next command:
sudo dnf makecache --refresh
After updating database,
You can install disulfinder using
dnf by running the
sudo dnf -y install disulfinder
Install disulfinder on Fedora 34 using yum
Because disulfinder is available in Fedora 34’s default
it is possible to install it from these repositories using the
To begin, update local packages database with
yum using the following command.
sudo yum makecache --refresh
Now can install disulfinder package on your server/computer by running the following command:
sudo yum -y install disulfinder
How to upgrade (update) a single package disulfinder using yum?
To update all the packages available on the system:
If you want to update a specific package like disulfinder in this example you should use the following command:
yum update disulfinder
To downgrade a package to an earlier version:
yum downgrade disulfinder
How to Upgrade disulfinder on Fedora 34 with dnf?
When you run the
dnf update, all system packages with available updates are updated.
However, if you want to upgrade a single package, then you would have to pass the package name as
the argument to the dnf update command.
dnf update disulfinder
How To remove disulfinder from Fedora 34
To uninstall only the
disulfinder package you can execute
sudo dnf remove disulfinder
Extra info and code examples
'disulfinder' is for predicting the disulfide bonding state of cysteines and their disulfide connectivity starting from sequence alone. Disulfide bridges play a major role in the stabilization of the folding process for several proteins. Prediction of disulfide bridges from sequence alone is therefore useful for the study of structural and functional properties of specific proteins. In addition, knowledge about the disulfide bonding state of cysteines may help the experimental structure determination process and may be useful in other genomic annotation tasks. 'disulfinder' predicts disulfide patterns in two computational stages: (1) the disulfide bonding state of each cysteine is predicted by a BRNN-SVM binary classifier; (2) cysteines that are known to participate in the formation of bridges are paired by a Recursive Neural Network to obtain a connectivity pattern.
- Maintainer: Debian Med Packaging Team
- Sources url: http://disulfind.dsi.unifi.it/
- Section/Category: science
You now have a full guide on how to install
yum package managers.
Also, we showed how to update manually as a single package and different ways to uninstall
the disulfinder from Fedora 34.