How To Install config.PLS on Fedora 34
In this tutorial, we will discuss How To Install config.PLS on Fedora 34
using dnf
and yum
package managers.
Also, we will demonstrate how to uninstall and update
config.PLS
as well.
One-liner Install Command
If you are only interested in the installation command, here is a quick answer for you:
sudo yum makecache && sudo yum -y install libchado-perl
or if you use dnf
:
sudo dnf makecache && sudo dnf -y install libchado-perl
But if you are interested in the details with step-by-step instructions, the following information will be helpful.
What is config.PLS
and How to Install It?
Short description: database schema and tools for genomic data
First things first, you will need access to a server or computer running Fedora 34. This guide was written specifically with a server running Fedora 34 in mind, although it should also work on older, supported versions of the operating system.
Also, make sure you are running a regular, non-root user with sudo privileges configured on your server. When you have an account available, log in as your non-root user to begin.
There are several ways to install config.PLS on Fedora 34. You can use (links are clickable):
In the following sections, we will describe each method in detail. You can choose one of them or refer to the recommended one.
Install config.PLS on Fedora 34 using dnf
First, update dnf packages database with dnf
by running the next command:
sudo dnf makecache --refresh
After updating database,
You can install config.PLS using dnf
by running the
following command:
sudo dnf -y install libchado-perl
Install config.PLS on Fedora 34 using yum
Because config.PLS is available in Fedora 34’s default
repositories,
it is possible to install it from these repositories using the yum
packaging
system.
To begin, update local packages database with yum
using the following command.
sudo yum makecache --refresh
Now can install config.PLS package on your server/computer by running the following command:
sudo yum -y install libchado-perl
How to upgrade (update) a single package config.PLS using yum?
To update all the packages available on the system:
yum update
If you want to update a specific package like config.PLS in this example you should use the following command:
yum update libchado-perl
To downgrade a package to an earlier version:
yum downgrade libchado-perl
How to Upgrade config.PLS on Fedora 34 with dnf?
When you run the dnf update
, all system packages with available updates are updated.
However, if you want to upgrade a single package, then you would have to pass the package name as
the argument to the dnf update command.
dnf update libchado-perl
How To remove config.PLS from Fedora 34
To uninstall only the config.PLS
package you can execute
the
following command:
sudo dnf remove libchado-perl
Extra info and code examples
Chado is a relational database schema that underlies many GMOD installations. It is capable of representing many of the general classes of data frequently encountered in modern biology such as sequence, sequence comparisons, phenotypes, genotypes, ontologies, publications, and phylogeny. It has been designed to handle complex representations of biological knowledge and should be considered one of the most sophisticated relational schemas currently available in molecular biology. The price of this capability is that the new user must spend some time becoming familiar with its fundamentals.
- Maintainer: Debian Med Packaging Team
- Sources url: http://gmod.org/wiki/Chado
- Section/Category: perl
Conclusion
You now have a full guide on how to install config.PLS
using dnf
and yum
package managers.
Also, we showed how to update manually as a single package and different ways to uninstall
the config.PLS from Fedora 34.